MOOD publications

MOOD project is at the forefront of European research of infectious disease surveillance and modelling from a data science perspective, investigating the impact of global warming on disease outbreaks, and proposing innovations for building of One Health systems across Europe and the world. 

In the table below all publications to which the MOOD project contributed are listed. Use the filter to select the most relevant articles.

166 entries « 2 of 9 »
146.

Hobeika, Alexandre; Stauffer, Maxime Henri Tibault; Dub, Timothée; van Bortel, Wim; Beniston, Martin; Bukachi, Salome; Burci, Gian Luca; Crump, Lisa; Markotter, Prof Wanda; Sepe, Ludovico Pasquale; Placella, Enrichetta; Roche, Benjamin; Thiongane, Oumy; Wang, Zhanyun; Guérin, Frédérique; van Kleef, Esther

The values and risks of an Intergovernmental Panel for One Health to strengthen pandemic prevention, preparedness, and response Journal Article

In: The values and risks of an Intergovernmental Panel for One Health to strengthen pandemic prevention, preparedness, and response, vol. 11, iss. 8, pp. 1301-1307, 2023.

Abstract | Links | BibTeX | Tags: Covid-19 (Coronavirus)

145.

Dub, Timothee; Mäkelä, Henna; Kleef, Esther Van; Leblond, Agnes; Mercier, Alizé; Hénaux, Viviane; Bouyer, Fanny; Binot, Aurelie; Thiongane, Oumy; Lancelot, Renaud; Delconte, Valentina; Zamuner, Lea; Bortel, Wim Van; Arsevska, Elena

Epidemic intelligence activities among national public and animal health agencies: a European cross-sectional study Journal Article

In: 2023.

Abstract | Links | BibTeX | Tags:

144.

Kafando, Rodrique; Decoupes, Rémy; Roche, Mathieu; Teisseire, Maguelonne

SNEToolkit: Spatial Named Entities disambiguation Toolkit Journal Article

In: SoftwareX, 2023.

Abstract | Links | BibTeX | Tags: OpenDataSet

143.

joseph l.-h. tsui,; john t. mccrone,; ben lambert,; sumali bajaj,; rhys p. d. inward,; paolo bosetti,; rosario evans pena,; houriiyah tegally,; verity hill,; alexander e. zarebski,; thomas p. peacock,; luyang liu,; neo wu,; megan davis,; isaac i. bogoch,; kamran khan,; meaghan kall,; nurin iwani binti abdul aziz,; rachel colquhoun,; áine o’toole,; ben jackson,; abhishek dasgupta,; eduan wilkinson,; tulio de oliveira,; the covid-19 genomics uk (cog-uk) consortium,; thomas r. connor,; nicholas j. loman,; vittoria colizza,; christophe fraser,; erik volz,; xiang ji,; bernardo gutierrez,; meera chand,; simon dellicour,; simon cauchemez,; jayna raghwani,; marc a. suchard,; philippe lemey,; andrew rambaut,; oliver g. pybus,; moritz u. g. kraemer,

Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1 Journal Article

In: Science, vol. 381, iss. 6655, pp. 336-343, 2023.

Abstract | Links | BibTeX | Tags: Covid-19 (Coronavirus), OpenDataSet

142.

Decoupes, Rémy; Roche, Mathieu; Teisseire, Maguelonne

GeoNLPlify: A spatial data augmentation enhancing text classification for crisis monitoring Journal Article

In: Intelligent Data Analysis, pp. 1-25, 2023.

Abstract | Links | BibTeX | Tags: OpenDataSet, Text mining

141.

Valentin, Sarah; Decoupes, Rémy; Lancelot, Renaud; Roche, Mathieu

Animal disease surveillance: How to represent textual data for classifying epidemiological information Journal Article

In: ScienceDirect, 2023.

Abstract | Links | BibTeX | Tags:

140.

Dagostin, Francesca; Tagliapietra, Valentina; Marini, Giovanni; Ferrari, Giulia; Cervellini, Marco; Wint, William; Alexander, Neil S.; Zuccali, Maria Grazia; Molinaro, Silvia; Fiorito, Nahuel; Dub, Timothée; Rocchini, Duccio; Rizzoli, Annapaola

High habitat richness reduces the risk of tick-borne encephalitis in Europe: A multi-scale study Journal Article

In: One Health, vol. 18, pp. 100669, 2023, ISSN: 2352-7714.

Abstract | Links | BibTeX | Tags: TBE (Tick Borne Encephalitis)

139.

Marini, Giovanni; Tagliapietra, Valentina; Cristofolini, Fabiana; Cristofori, Antonella; Dagostin, Francesca; Zuccali, Maria Grazia; Molinaro, Silvia; Gottardini, Elena; Rizzoli, Annapaola

Correlation between airborne pollen data and the risk of tick-borne encephalitis in northern Italy Journal Article

In: 2023.

Abstract | Links | BibTeX | Tags: OpenDataSet, TBE (Tick Borne Encephalitis)

138.

Cuypers, Lize; Keyaerts, Els; Hong, Samuel Leandro; Gorissen, Sarah; Menezes, Soraya Maria; Starick, Marick; Elslande, Jan Van; Weemaes, Matthias; Wawina-Bokalanga, Tony; Marti-Carreras, Joan; Vanmechelen, Bert; Holm, Bram Van; Bloemen, Mandy; Dogne, Jean-Michel; Dufrasne, François; Durkin, Keith; Ruelle, Jean; Mendonca, Ricardo De; Wollants, Elke; Vermeersch, Pieter; Consortium, COVID-19 Genomics Belgium; Boulouffe, Caroline; Djiena, Achille; Broucke, Caroline; Catry, Boudewijn; Lagrou, Katrien; Ranst, Marc Van; Neyts, Johan; Baele, Guy; Maes, Piet; André, Emmanuel; Dellicour, Simon; Weyenbergh, Johan Van

Immunovirological and environmental screening reveals actionable risk factors for fatal COVID-19 during post-vaccination nursing home outbreaks Journal Article

In: Nature Aging , vol. 3, pp. 722–733, 2023.

Abstract | Links | BibTeX | Tags: Covid-19 (Coronavirus), OpenDataSet

137.

Syed, Mehtab Alam; Arsevska, Elena; Roche, Mathieu; Teissere, Maguelonne

A metadata approach to classify domain-specific documents for Event-based Surveillance Systems Conference

International Conference on Communication, Computing and Digital Systems (C-CODE), 2023.

Links | BibTeX | Tags:

136.

de Meijere, Giulia; Valdano, Eugenio; Castellano, Claudio; Debin, Marion; Kengne-Kuetche, Charly; Turbelin, Clément; Noël, Harold; Weitz, Joshua S.; Paolotti, Daniela; Hermans, Lisa; Hens, Niel; Colizza, Vittoria

Attitudes towards booster, testing and isolation, and their impact on COVID-19 response in winter 2022/2023 in France, Belgium, and Italy: a cross-sectional survey and modelling study Journal Article

In: 2023.

Abstract | Links | BibTeX | Tags: Covid-19 (Coronavirus), OpenDataSet

135.

Menegale, Francesco; Manica, Mattia; Zardini, Agnese

Evaluation of Waning of SARS-CoV-2 Vaccine–Induced Immunity Journal Article

In: JAMA Network, 2023.

Abstract | Links | BibTeX | Tags: Covid-19 (Coronavirus), OpenDataSet

134.

Fesce, Elisa; Marini, Giovanni; Rosà, Roberto; Lelli, Davide; Cerioli, Monica Pierangela; Chiari, Mario; Farioli, Marco; Ferrari, Nicola

Understanding West Nile virus transmission: Mathematical modelling to quantify the most critical parameters to predict infection dynamics Journal Article

In: 2023.

Abstract | Links | BibTeX | Tags: OpenDataSet, WNV (West Nile Virus)

133.

Dellicour, Simon; Hong, Samuel L.; Hill, Verity; Dimartino, Dacia; Marier, Christian; Zappile, Paul; Harkins, Gordon W.; Lemey, Philippe; Baele, Guy; Duerr, Ralf; Heguy, Adriana

Variant-specific introduction and dispersal dynamics of SARS-CoV-2 in New York City – from Alpha to Omicron Journal Article

In: Plos Pathogens, 2023.

Abstract | Links | BibTeX | Tags: Covid-19 (Coronavirus), OpenDataSet

132.

Vogels, Chantal B. F.; Brackney, Doug E.; Dupuis, Alan P.; Robich, Rebecca M.; Fauver, Joseph R.; Brito, Anderson F.; Williams, Scott C.; Anderson, John F.; Lubelczyk, Charles B.; Lange, Rachel E.; Prusinski, Melissa A.; Kramer, Laura D.; Gangloff-Kaufmann, Jody L.; Goodman, Laura B.; Baele, Guy; Smith, Robert P.; Armstrong, Philip M.; Ciota, Alexander T.; Dellicour, Simon; Grubaugh, Nathan D.

Phylogeographic reconstruction of the emergence and spread of Powassan virus in the northeastern United States Journal Article

In: PNAS, 2023.

Abstract | Links | BibTeX | Tags: OpenDataSet

131.

Cataldo, Claudia; Bellenghi, Maria; Masella, Roberta; Busani, Luca

One Health challenges and actions: Integration of gender considerations to reduce risks at the human-animal-environmental interface Journal Article

In: vol. 16, 2023.

Abstract | Links | BibTeX | Tags:

130.

Arinik, Nejat; Interdonato, Roberto; Roche, Mathieu; Teisseire, Maguelonne

An Evaluation Framework For Comparing Epidemic Intelligence Systems Journal Article

In: IEEE Xplore, 2023.

Abstract | Links | BibTeX | Tags: OpenDataSet

129.

Viau, Laëtitia; Sallaberry, Arnaud; Rodriguez, Nancy; Girres, Jean-François; Poncelet, Pascal

Polygon vector map distortion for increasing the readability ofone-to-many flow maps Journal Article

In: 2023.

Abstract | Links | BibTeX | Tags: OpenDataSet

128.

Marini, Giovanni; Arnoldi, Daniele; Rizzoli, Annapaola; Tagliapietra, Valentina

Estimating rodent population abundance using early climatic predictors Journal Article

In: European Journal of Wildlife Research, vol. 69, no. 2, pp. 36, 2023.

Links | BibTeX | Tags: OpenDataSet, TBE (Tick Borne Encephalitis)

127.

Messina, Jane Paula; Wint, William G R

The spatial distribution of Crimean Congo haemorrhagic fever in Europe and neighbouring areas Technical Report

2023.

Abstract | Links | BibTeX | Tags: CCHF (Crimean Congo haemorrhagic fever virus), OpenDataSet

166 entries « 2 of 9 »

Top-cited MOOD publications

Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK
Plessis et al., 2020
Evolution and epidemic spread of SARS-CoV-2 in Brazil
Darlan et al., 2020
Preparedness and vulnerability of African countries against importations of COVID-19: a modelling study
Gilbert et al., 2020
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence
Moritz et al., 2020
Crowding and the shape of COVID-19 epidemics
Rader et al., 2020
Potential short-term outcome of an uncontrolled COVID-19 epidemic in Lombardy, Italy, February to March 2020
Guzzetta et al., 2020
Novel coronavirus (2019-nCoV) early-stage importation risk to Europe, January 2020
Pullano et al., 2020