MOOD publications

MOOD project is at the forefront of European research of infectious disease surveillance and modelling from a data science perspective, investigating the impact of global warming on disease outbreaks, and proposing innovations for building of One Health systems across Europe and the world. 

In the table below all publications to which the MOOD project contributed are listed. Use the filter to select the most relevant articles.

166 entries « 1 of 9 »
166.

Menya, Edmond; Interdonato, Roberto; Owuor, Dickson; Roche, Mathieu

Explainable epidemiological thematic features for event based disease surveillance Journal Article

In: ScienceDirect, vol. 250, 2024.

Abstract | Links | BibTeX | Tags: OpenDataSet, Text mining

165.

Bouyer, Fanny; Thiongane, Oumy; Hobeika, Alexandre; Arsevska, Elena; Binot, Aurélie; Corrèges, Déborah; Dub, Timothée; Mäkelä, Henna; van Kleef, Esther; Jori, Ferran; Lancelot, Renaud; Mercier, Alize; Fagandini, Francesca; Valentin, Sarah; Bortel, Wim Van; Ruault, Claire

Epidemic intelligence in Europe: a user needs perspective to foster innovation in digital health surveillance Journal Article

In: BMC Public Health, no. 973, 2024.

Abstract | Links | BibTeX | Tags: OpenDataSet

164.

Faucher, Benjamin; Sabbatini, Chiara E.; Czuppon, Peter; Kraemer, Moritz U. G.; Lemey, Philippe; Colizza, Vittoria; Blanquart, François; Boëlle, Pierre-Yves; Poletto, Chiara

Drivers and impact of the early silent invasion of SARS-CoV-2 Alpha Journal Article

In: Nature Communications, vol. 15, no. 2152, 2024.

Abstract | Links | BibTeX | Tags: Covid-19 (Coronavirus), OpenDataSet

163.

Erazo, Diana; Grant, Luke; Ghisbain, Guillaume; Marini, Giovanni; Colón-González, Felipe J.; Wint, William; Rizzoli, Annapaola; Bortel, Wim Van; Vogels, Chantal B. F.; Grubaugh, Nathan D.; Mengel, Matthias; Frieler, Katja; Thiery, Wim; Dellicour, Simon

Contribution of climate change to the spatial expansion of West Nile virus in Europe Journal Article

In: Nature Communications, vol. 15, no. 1196, 2024.

Abstract | Links | BibTeX | Tags: WNV (West Nile Virus)

162.

Arsevska, Elena; Hengl, Tomislav; Singleton, David A.; Noble, Peter-John M.; Caminade, Cyril; Eneanya, Obiora; Jones, Philip H.; Hansford, Kayleigh; Medlock, Jolyon; Bonannella, Carmelo; Radford, Alan D.

Risk factors for tick attachment in companion animals in Great Britain: a spatiotemporal analysis covering 2014–2021 Journal Article

In: Parasites and Vectors, 2024.

Links | BibTeX | Tags: OpenDataSet, TBE (Tick Borne Encephalitis)

161.

Sabbatini, Chiara E.; Pullano, Giulia; Domenico, Laura Di; Rubrichi, Stefania; & Vittoria Colizza, Shweta Bansal

The impact of spatial connectivity on NPIs effectiveness Journal Article

In: BMC Infectious Diseases, no. 21, 2024.

Abstract | Links | BibTeX | Tags: Covid-19 (Coronavirus)

160.

Mulchandani, Ranya; Zhao, Cheng; Tiseo, Katie; Pires, João; Boeckel, Thomas P. Van

Predictive Mapping of Antimicrobial Resistance for Escherichia coli, Salmonella, and Campylobacter in Food-Producing Animals, Europe, 2000–2021 Journal Article

In: Emerging Infectious Diseases, pp. 96-104, 2024.

Abstract | Links | BibTeX | Tags: AMR (Antimicrobial Resistance), OpenDataSet

159.

Valdano, Eugenio; Colombi, Davide; Poletto, Chiara; Colizza, Vittoria

Epidemic graph diagrams as analytics for epidemic control in the data-rich era Journal Article

In: Nature Communications, 2023.

Abstract | Links | BibTeX | Tags: HPAI (Avian Influenza), OpenDataSet

158.

Cheng, Qu; Jing, Qinlong; Collender, Philip A.; Head, Jennifer R.; Li, Qi; Yu, Hailan; Li, Zhichao; Ju, Yang; Chen, Tianmu; Wang, Peng; Cleary, Eimear; Lai, Shengjie

Prior water availability modifies the effect of heavy rainfall on dengue transmission: a time series analysis of passive surveillance data from southern China Journal Article

In: Frontiers Public Health, vol. 11, 2023.

Abstract | Links | BibTeX | Tags: DEN (Dengue), OpenDataSet

157.

Zortman, Iyonna; de Garine-Wichatitsky, Michel; Arsevska, Elena; Dub, Timothée; Bortel, Wim Van; Lefrançois, Estelle; Vial, Laurence; Pollet, Thomas; Aurélie Binot,

A social-ecological systems approach to tick bite and tick-borne disease risk management: Exploring collective action in the Occitanie region in southern France Journal Article

In: One Health, vol. 17, pp. 100630, 2023, ISSN: 2352-7714.

Abstract | Links | BibTeX | Tags: TBE (Tick Borne Encephalitis)

156.

Inward, Rhys P. D.; Jackson, Felix; Dasgupta, Abhishek; Lee, Graham; Battle, Anya Lindström; Parag, Kris V.; Kraemer, Moritz U. G.

Impact of spatiotemporal heterogeneity in COVID-19 disease surveillance on epidemiological parameters and case growth rates Journal Article

In: Epidemics, vol. 41, pp. 100627, 2023, ISSN: 1755-4365.

Abstract | Links | BibTeX | Tags: Covid-19 (Coronavirus), OpenDataSet

155.

SYED, Mehtab Alam; ARSEVSKA, Elena; ROCHE, Mathieu; TEISSEIRE, Maguelonne

GeospartRE: Extraction and Geocoding of spatial relation entities in textual documents Journal Article

In: Cartography and Geographic Information Science, 2023.

Links | BibTeX | Tags: OpenDataSet, Text mining

154.

Jore, Solveig; Viljugrein, Hildegunn; Hjertqvist, Marika; Dub, Timothée; Mäkelä, Henna

Outdoor recreation, tick borne encephalitis incidence and seasonality in Finland, Norway and Sweden during the COVID-19 pandemic (2020/2021) Journal Article

In: Infection Ecology & Epidemiology, vol. 13, no. 1, pp. 2281055, 2023.

Abstract | Links | BibTeX | Tags: Covid-19 (Coronavirus), TBE (Tick Borne Encephalitis)

153.

Dagostin, Francesca; Tagliapietra, Valentina; Marini, Giovanni; Cataldo, Claudia; Bellenghi, Maria; Pizzarelli, Scilla; Cammarano, Rosaria Rosanna; Wint, William; Alexander, Neil S; Neteler, Markus; Haas, Julia; Dub, Timothée; Busani, Luca; Rizzoli, Annapaola

Ecological and environmental factors affecting the risk of tick-borne encephalitis in Europe, 2017 to 2021 Journal Article

In: 2023.

Abstract | Links | BibTeX | Tags: TBE (Tick Borne Encephalitis)

152.

Mencattelli, Giulia; Ndione, Marie Henriette Dior; Silverj, Andrea; Diagne, Moussa Moise; Curini, Valentina; Teodori, Liana; Domenico, Marco Di; Mbaye, Rassoul; Leone, Alessandra; Marcacci, Maurilia; Gaye, Alioune; Ndiaye, ElHadji; Diallo, Diawo; Ancora, Massimo; Secondini, Barbara; Lollo, Valeria Di; Mangone, Iolanda; Bucciacchio, Andrea; Polci, Andrea; Marini, Giovanni; Rosà, Roberto; Segata, Nicola; Fall, Gamou; Cammà, Cesare; Monaco, Federica; Diallo, Mawlouth; Rota-Stabelli, Omar; Faye, Oumar; & Giovanni Savini, Annapaola Rizzoli

Spatial and temporal dynamics of West Nile virus between Africa and Europe Journal Article

In: Nature Communications, 2023.

Links | BibTeX | Tags: OpenDataSet, WNV (West Nile Virus)

151.

Dias, Hélder; Guimarães, Artur; Martins, Bruno; Roche, Mathieu

Unsupervised Key-Phrase Extraction from Long Texts with Multilingual Sentence Transformers Journal Article

In: pp. 141–155, 2023.

Abstract | Links | BibTeX | Tags: Text mining

150.

Messina, Jane Paula; Wint, William G R

The Spatial Distribution of Crimean–Congo Haemorrhagic Fever and Its Potential Vectors in Europe and Beyond Journal Article

In: Insects, vol. 14, no. 771, 2023, (This article is a version of the ECDC Technical report ‘The spatial distribution of Crimean-Congo haemorrhagic fever in Europe and neighbouring areas’ adapted for journal publication).

Abstract | Links | BibTeX | Tags: CCHF (Crimean Congo haemorrhagic fever virus), OpenDataSet

149.

Manica, Mattia; Marini, Giovanni; Solimini, Angelo; Guzzetta, Giorgio; Poletti, Piero; Scognamiglio, Paola; Virgillito, Chiara; della Torre, Alessandra; Merler, Stefano; Rosà, Roberto; Vairo, Francesco; Caputo, Beniamino

Reporting delays of chikungunya cases during the 2017 outbreak in Lazio region, Italy Journal Article

In: 2023.

Abstract | Links | BibTeX | Tags: CHIK (Chikungunya)

148.

Valentin, Sarah; Boudoua, Bahdja; Sewalk, Kara; Arınık, Nejat; Roche, Mathieu; Lancelot, Renaud; Arsevska, Elena

Dissemination of information in event-based surveillance, a case study of Avian Influenza Journal Article

In: PLoS ONE, 2023.

Abstract | Links | BibTeX | Tags: HPAI (Avian Influenza), OpenDataSet, Text mining

147.

Marziano, Valentina; Guzzetta, Giorgio; Menegale, Francesco; Sacco, Chiara; Petrone, Daniele; Urdiales, Alberto Mateo; Manso, Martina Del; Bella, Antonino; Fabiani, Massimo; Vescio, Maria Fenicia; Riccardo, Flavia; Poletti, Piero; Manica, Mattia; Zardini, Agnese; d'Andrea, Valeria; Trentini, Filippo; Stefanelli, Paola; Rezza, Giovanni; Palamara, Anna Teresa; Brusaferro, Silvio; Ajelli, Marco; Pezzotti, Patrizio; Merler, Stefano

Estimating SARS-CoV-2 infections and associated changes in COVID-19 severity and fatality Journal Article

In: 2023.

Abstract | Links | BibTeX | Tags: Covid-19 (Coronavirus), OpenDataSet

166 entries « 1 of 9 »

Top-cited MOOD publications

Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK
Plessis et al., 2020
Evolution and epidemic spread of SARS-CoV-2 in Brazil
Darlan et al., 2020
Preparedness and vulnerability of African countries against importations of COVID-19: a modelling study
Gilbert et al., 2020
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence
Moritz et al., 2020
Crowding and the shape of COVID-19 epidemics
Rader et al., 2020
Potential short-term outcome of an uncontrolled COVID-19 epidemic in Lombardy, Italy, February to March 2020
Guzzetta et al., 2020
Novel coronavirus (2019-nCoV) early-stage importation risk to Europe, January 2020
Pullano et al., 2020