MOOD publications

MOOD project is at the forefront of European research of infectious disease surveillance and modelling from a data science perspective, investigating the impact of global warming on disease outbreaks, and proposing innovations for building of One Health systems across Europe and the world. 

In the table below are listed all MOOD publications. Use the filter to select the most relevant articles.

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44 entries « 1 of 3 »
44.

Faucher, Benjamin; Assab, Rania; Roux, Jonathan; Levy-Bruhl, Daniel; Kiem, Cécile Tran; Cauchemez, Simon; Zanetti, Laura; Colizza, Vittoria; Boëlle, Pierre-Yves; Poletto, Chiara

Agent-based modelling of reactive vaccination of workplaces and schools against COVID-19 Journal Article

In: Nature Communications, vol. 13, no. 1414, 2022.

Abstract | Links | BibTeX | Tags: COVID-19

43.

Valdano, Eugenio; Lee, Jonggul; Rubrichi, Stefania; Colizza, Vittoria

Mobility during the first week of the second lockdown in France Technical Report

2021.

Abstract | Links | BibTeX | Tags: COVID-19, France, lock-down, surveillance

42.

Pullano, Giulia; Domenico, Laura Di; Colizza, Vittoria

Telework and other measures reducing the presence at work to slow down COVID-19pdm in France (Sept 2020) Technical Report

2021.

Abstract | Links | BibTeX | Tags: COVID-19, epidemiology, France, measures

41.

Pullano, Giulia; Domenico, Laura Di; Sabbatini, Chiara E.; Colizza, Vittoria

Expected impact of exit strategies after the second lockdown - France, Nov 2020 Technical Report

2021.

Abstract | Links | BibTeX | Tags: COVID-19, France, lock-down, measures

40.

Kraemer, Moritz U. G.; Fraser, Oliver G. Pybusand; Cauchemez, Christophe; Rambaut, Simon; Cowling, Andrew; Benjamin, J.

Monitoring key epidemiological parameters of SARS-CoV-2 transmission Journal Article

In: Nature Medicine, vol. 27, no. 1854–1855 , pp. 1–2, 2021.

Abstract | Links | BibTeX | Tags: COVID-19, epidemiology, transmission

39.

Faria, Nuno R.; Mellan, Thomas A.; Whittaker, Charles; Claro, Ingra M.; da S. Candido, Darlan; Mishra, Swapnil; Crispim, Myuki A. E.

Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil Journal Article

In: Science, vol. 372, no. 6544, pp. 815-821, 2021.

Abstract | Links | BibTeX | Tags: Brazil, COVID-19, epidemiology, phylogenetic

38.

Valentin, Sarah; Mercier, Alizé; Lancelot, Renaud; Roche, Mathieu; Arsevska, Elena

Monitoring online media reports for early detection of unknown diseases: Insight from a retrospective study of COVID-19 emergence Journal Article

In: Transboundary and Emerging Diseases, vol. 68, no. 3, pp. 981-986, 2021.

Abstract | Links | BibTeX | Tags: COVID-19, disease x, EBS, infectious diseases, media extraction, monitoring

37.

Decoupes, Rémy; Rodrique, Kafando; Roche, Mathieu; Teisseire, Maguelonne

H-TFIDF: What makes areas specific over time in the massive flow of tweets related to the covid pandemic? Journal Article

In: AGILE: GIScience Series, vol. 2, no. 4, pp. 1-8, 2021.

Abstract | Links | BibTeX | Tags: COVID-19, EBS, media extraction, Model, population dynamics, Public Health, Twitter

36.

Domenico, Laura Di; Sabbatini, Chiara E.; Pullano, Giulia; Lévy-Bruhl, Daniel; Colizza, Vittoria

Impact of lockdown on COVID-19 epidemic in Ile-de-France and possible exit strategies Journal Article

In: medRxiv, no. 2, 2021.

Abstract | Links | BibTeX | Tags: COVID-19, epidemiology, Europe, Public Health

35.

Huang, Bo; Wang, Jionghua; Cai, Jixuan; Yao, Shiqi; Chan, Paul Kay Sheung; Tam, Tony Hong-wing; Hong, Ying-Yi; Ruktanonchai, Corrine W.; Carioli, Alessandra; Floyd, Jessica R.; Ruktanonchai, Nick W.; Yang, Weizhong; Li, Zhongjie; Tatem, Andrew J.; Lai, Shengjie

Integrated vaccination and physical distancing interventions to prevent future COVID-19 waves in Chinese cities Journal Article

In: Nature Human Behaviour, vol. 5, pp. 695–705, 2021.

Abstract | Links | BibTeX | Tags: China, COVID-19, epidemiology, vaccine

34.

López, Jesús A. Moreno; García, Beatriz Arregui; Bentkowski, Piotr; Bioglio, Livio; Pinotti, Francesco; Boëlle, Pierre-Yves; Barrat, Alain; Colizza, Vittoria; Poletto, Chiara

Anatomy of digital contact tracing: Role of age, transmission setting, adoption, and case detection Journal Article

In: Science Advances, vol. 7, no. 15, pp. eabd8750, 2021.

Abstract | Links | BibTeX | Tags: Contact tracing, COVID-19, Human health, surveillance

33.

Plessis, Louis; McCrone, John T.; Zarebski, Alexander E.; Hill, Verity; Ruis, Christopher; Gutierrez, Bernardo; Raghwani, Jayna; Ashworth, Jordan; Colquhoun, Rachel; Connor, Thomas R.; Faria, Nuno R.; Jackson, Ben; Loman, Nicholas J.; O’Toole, Áine; Nicholls, Samuel M.; Parag, Kris V.; Scher, Emily; Vasylyeva, Tetyana I.; Volz, Erik M.; Watts, Alexander; Bogoch, Isaac I.; Khan, Kamran; null,; Aanensen, David M.; Kraemer, Moritz U. G.; Rambaut, Andrew; Pybus, Oliver G.

Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK Journal Article

In: Science, vol. 371, no. 6530, pp. 708-712, 2021.

Abstract | Links | BibTeX | Tags: COVID-19, epidemiology, genome, phylogenetic, travel, United Kingdom

32.

Valdano, Eugenio; Lee, Jonggul; Bansal, Shweta; Rubrichi, Stefania; Colizza, Vittoria

Highlighting socio-economic constraints on mobility reductions during COVID-19 restrictions in France can inform effective and equitable pandemic response Journal Article

In: Journal of Travel Medicine, vol. 28, no. 4, 2021, ISSN: 1708-8305, (taab045).

Links | BibTeX | Tags: COVID-19, France, mobility, social science

31.

Manica, Mattia; Guzzetta, Giorgio; Riccardo, Flavia; Valenti, Antonio; Poletti, Piero; Marziano, Valentina; Trentini, Filippo; Andrianou, Xanthi; Urdiales, Alberto Mateo; Manso, Martina; Fabiani, Massimo; Vescio, Maria Fenicia; Spuri, Matteo; Petrone, Daniele; Bella, Antonino; Iavicoli, Sergio; Ajelli, Marco; Brusaferro, Silvio; Pezzotti, Patrizio; Merler, Stefano

Impact of tiered restrictions on human activities and the epidemiology of the second wave of COVID-19 in Italy Journal Article

In: medRxiv, 2021.

Abstract | Links | BibTeX | Tags: COVID-19, Italy, measures, Public Health, surveillance

30.

Poletti, Piero; Tirani, Marcello; Cereda, Danilo; Trentini, Filippo; Guzzetta, Giorgio; Sabatino, Giuliana; Marziano, Valentina; Castrofino, Ambra; Grosso, Francesca; Castillo, Gabriele Del; others,

Association of age with likelihood of developing symptoms and critical disease among close contacts exposed to patients with confirmed sars-cov-2 infection in italy Journal Article

In: JAMA network open, vol. 4, no. 3, pp. e211085–e211085, 2021.

Links | BibTeX | Tags: Contact tracing, COVID-19, Italy

29.

Domenico, Laura Di; Pullano, Giulia; Sabbatini, Chiara E.; Bo""elle, Pierre-Yves; Colizza, Vittoria

Modelling safe protocols for reopening schools during the COVID-19 pandemic in France Journal Article

In: medRxiv, 2021.

Abstract | Links | BibTeX | Tags: COVID-19, France, Model, school

28.

Valentin, Sarah; Mercier, Alizé; Lancelot, Renaud; Roche, Mathieu; Arsevska, Elena

Monitoring online media reports for early detection of unknown diseases: Insight from a retrospective study of COVID-19 emergence Journal Article

In: Transboundary and emerging diseases, vol. 68, no. 3, pp. 981–986, 2021.

Abstract | Links | BibTeX | Tags: COVID-19, data mining, EBS, Event extraction, media extraction, monitoring, ProMed

27.

MacLean, Oscar A; Lytras, Spyros; Weaver, Steven; Singer, Joshua B; Boni, Maciej F; Lemey, Philippe; Pond, Sergei L Kosakovsky; Robertson, David L

Natural selection in the evolution of SARS-CoV-2 in bats created a generalist virus and highly capable human pathogen Journal Article

In: PLoS biology, vol. 19, no. 3, pp. e3001115, 2021.

Abstract | BibTeX | Tags: COVID-19, genome

26.

Ingelbeen, Brecht; Peckeu, Laur`ene; Laga, Marie; Hendrix, Ilona; Neven, Inge; Sande, Marianne AB; Kleef, Esther

Reducing contacts to stop SARS-CoV-2 transmission during the second pandemic wave in Brussels, Belgium, August to November 2020 Journal Article

In: Eurosurveillance, vol. 26, no. 7, pp. 2100065, 2021.

Abstract | Links | BibTeX | Tags: Belgium, COVID-19, epidemiology, Model, school, transmission

25.

Hu, Maogui; Wang, Jinfeng; Lin, Hui; Ruktanonchai, Corrine W; Xu, Chengdong; Meng, Bin; Zhang, Xin; Carioli, Alessandra; Feng, Yuqing; Yin, Qian; Floyd, Jessica R; Ruktanonchai, Nick W; Li, Zhongjie; Yang, Weizhong; Tatem, Andrew J; Lai, Shengjie

Risk of SARS-CoV-2 Transmission among Air Passengers in China Journal Article

In: Clinical Infectious Diseases, 2021, ISSN: 1058-4838, (ciab836).

Abstract | Links | BibTeX | Tags: airplanes, COVID-19, mobility, transmission

44 entries « 1 of 3 »

Top-cited MOOD publications

Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK
Plessis et al., 2020
Evolution and epidemic spread of SARS-CoV-2 in Brazil
Darlan et al., 2020
Preparedness and vulnerability of African countries against importations of COVID-19: a modelling study
Gilbert et al., 2020
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence
Moritz et al., 2020
Crowding and the shape of COVID-19 epidemics
Rader et al., 2020
Potential short-term outcome of an uncontrolled COVID-19 epidemic in Lombardy, Italy, February to March 2020
Guzzetta et al., 2020
Novel coronavirus (2019-nCoV) early-stage importation risk to Europe, January 2020
Pullano et al., 2020