MOOD publications

MOOD project is at the forefront of European research of infectious disease surveillance and modelling from a data science perspective, investigating the impact of global warming on disease outbreaks, and proposing innovations for building of One Health systems across Europe and the world. 

In the table below are listed all MOOD publications. Use the filter to select the most relevant articles.

56 entries « 3 of 3 »
16.

Roche, Mathieu

COVID-19 and Media datasets: Period-and location-specific textual data mining Journal Article

In: Data in brief, 33 , pp. 106356, 2020.

Abstract | Links | BibTeX | Tags: COVID-19, machine learning, media extraction, Text mining

15.

Rader, Benjamin; Scarpino, Samuel V; Nande, Anjalika; Hill, Alison L; Adlam, Ben; Reiner, Robert C; Pigott, David M; Gutierrez, Bernardo; Zarebski, Alexander E; Shrestha, Munik; others,

Crowding and the shape of COVID-19 epidemics Journal Article

In: Nature medicine, 26 (12), pp. 1829–1834, 2020.

Abstract | Links | BibTeX | Tags: COVID-19, epidemiology, population dynamics

14.

Lai, Shengjie; Ruktanonchai, Nick W; Zhou, Liangcai; Prosper, Olivia; Luo, Wei; Floyd, Jessica R; Wesolowski, Amy; Santillana, Mauricio; Zhang, Chi; Du, Xiangjun; others,

Effect of non-pharmaceutical interventions to contain COVID-19 in China Journal Article

In: nature, 585 (7825), pp. 410–413, 2020.

Abstract | Links | BibTeX | Tags: COVID-19, epidemiology, health policy, Model

13.

Dellicour, Simon; Lequime, Sebastian; Vrancken, Bram; Gill, Mandev S; Bastide, Paul; Gangavarapu, Karthik; Matteson, Nathaniel L; Tan, Yi; Plessis, Louis Du; Fisher, Alexander A; others,

Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework Journal Article

In: Nature communications, 11 (1), pp. 1–11, 2020.

Abstract | Links | BibTeX | Tags: Ecological epidemiology, Molecular ecology, phylogenetic, West Nile Virus

12.

Pullano, Giulia; Valdano, Eugenio; Scarpa, Nicola; Rubrichi, Stefania; Colizza, Vittoria

Evaluating the effect of demographic factors, socioeconomic factors, and risk aversion on mobility during the COVID-19 epidemic in France under lockdown: a population-based study Journal Article

In: The Lancet Digital Health, 2 (12), pp. e638–e649, 2020.

Abstract | Links | BibTeX | Tags: big data, contac tracing, COVID-19, epidemiology, France, measures, mobility, transmission

11.

Candido, Darlan S; Claro, Ingra M; Jesus, Jaqueline G De; Souza, William M; Moreira, Filipe RR; Dellicour, Simon; Mellan, Thomas A; Plessis, Louis Du; Pereira, Rafael HM; Sales, Flavia CS; others,

Evolution and epidemic spread of SARS-CoV-2 in Brazil Journal Article

In: Science, 369 (6508), pp. 1255–1260, 2020.

Abstract | Links | BibTeX | Tags: big data, Brazil, Contact tracing, COVID-19, epidemiology, measures, mobility, transmission

10.

Zhang, Juanjuan; Litvinova, Maria; Wang, Wei; Wang, Yan; Deng, Xiaowei; Chen, Xinghui; Li, Mei; Zheng, Wen; Yi, Lan; Chen, Xinhua; others,

Evolving epidemiology and transmission dynamics of coronavirus disease 2019 outside Hubei province, China: a descriptive and modelling study Journal Article

In: The Lancet Infectious Diseases, 20 (7), pp. 793–802, 2020.

Abstract | Links | BibTeX | Tags: China, COVID-19, epidemiology, transmission

9.

Tiseo, Katie; Huber, Laura; Gilbert, Marius; Robinson, Timothy P.; Boeckel, Thomas P. Van

Global Trends in Antimicrobial Use in Food Animals from 2017 to 2030 Journal Article

In: Antibiotics, 9 (12), 2020, ISSN: 2079-6382.

Abstract | Links | BibTeX | Tags: AMR, Animal disease surveillance, Anitmicrobial Resistance, Human health, Model

8.

Zhao, Cheng; Tepekule, Burcu; Criscuolo, Nicola G.; Garcia, Pedro David Wendel; Hilty, Matthias Peter; Switzerland, Risc-Icu Consortium Investigators In; Fumeaux, Thierry; Boeckel, Thomas P. Van

icumonitoring.ch: a platform for short-term forecasting of intensive care unit occupancy during the COVID-19 epidemic in Switzerland. Journal Article

In: Swiss medical weekly, 150 , pp. w20277, 2020.

Links | BibTeX | Tags: COVID-19, epidemiology, ICU, Model, platform, Switzerland

7.

Guzzetta, Giorgio; Poletti, Piero; Ajelli, Marco; Trentini, Filippo; Marziano, Valentina; Cereda, Danilo; Tirani, Marcello; Diurno, Giulio; Bodina, Annalisa; Barone, Antonio; others,

Potential short-term outcome of an uncontrolled COVID-19 epidemic in Lombardy, Italy, February to March 2020 Journal Article

In: Eurosurveillance, 25 (12), pp. 2000293, 2020.

Abstract | Links | BibTeX | Tags: COVID-19, Italy, Model, Public Health, transmission

6.

Gilbert, Marius; Pullano, Giulia; Pinotti, Francesco; Valdano, Eugenio; Poletto, Chiara; Bo""elle, Pierre-Yves; dÓrtenzio, Eric; Yazdanpanah, Yazdan; Eholie, Serge Paul; Altmann, Mathias; others,

Preparedness and vulnerability of African countries against importations of COVID-19: a modelling study Journal Article

In: The Lancet, 395 (10227), pp. 871–877, 2020.

Abstract | Links | BibTeX | Tags: Africa, COVID-19, transmission, vulnerability

5.

Guzzetta, Giorgio; Vairo, Francesco; Mammone, Alessia; Lanini, Simone; Poletti, Piero; Manica, Mattia; Rosa, Roberto; Caputo, Beniamino; Solimini, Angelo; Torre, Alessandra Della; others,

Spatial modes for transmission of chikungunya virus during a large chikungunya outbreak in Italy: a modeling analysis Journal Article

In: BMC medicine, 18 (1), pp. 1–10, 2020.

Abstract | Links | BibTeX | Tags: Chikungunya, Spatiotemporal spread, Transmission chain, Transmission distance

4.

Chinazzi, Matteo; Davis, Jessica T; Ajelli, Marco; Gioannini, Corrado; Litvinova, Maria; Merler, Stefano; Piontti, Ana Pastore; Mu, Kunpeng; Rossi, Luca; Sun, Kaiyuan; others,

The effect of travel restrictions on the spread of the 2019 novel coronavirus (COVID-19) outbreak Journal Article

In: Science, 368 (6489), pp. 395–400, 2020.

Abstract | BibTeX | Tags: COVID-19, measures, mobility, Model, population dynamics

3.

Guzzetta, Giorgio; Riccardo, Flavia; Marziano, Valentina; Poletti, Piero; Trentini, Filippo; Bella, Antonino; Andrianou, Xanthi; Manso, Martina Del; Fabiani, Massimo; Bellino, Stefania; others,

The impact of a nation-wide lockdown on COVID-19 transmissibility in Italy Journal Article

In: arXiv preprint arXiv:2004.12338, 2020.

Abstract | Links | BibTeX | Tags: COVID-19, epidemiology, Italy, lock-down, reproduction number, transmission, zoonoses

2.

Pinotti, Francesco; Domenico, Laura Di; Ortega, Ernesto; Mancastroppa, Marco; Pullano, Giulia; Valdano, Eugenio; Boëlle, Pierre-Yves; Poletto, Chiara; Colizza, Vittoria

Tracing and analysis of 288 early SARS-CoV-2 infections outside China: A modeling study Journal Article

In: PLOS Medicine, 17 (7), pp. 1-13, 2020.

Abstract | Links | BibTeX | Tags: COVID-19, epidemiology, reverse transcription-polymerase chain reaction, RT-PCR, STROBE

1.

Roche, Mathieu

COVID-19 and Media datasets: Period- and location-specific textual data mining Journal Article

In: Data in Brief, SI: COVID-19 Data , pp. 106356, 2020, ISBN: 2352-3409.

Abstract | Links | BibTeX | Tags:

56 entries « 3 of 3 »

Top-cited MOOD publications

Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK
Plessis et al., 2020
Evolution and epidemic spread of SARS-CoV-2 in Brazil
Darlan et al., 2020
Preparedness and vulnerability of African countries against importations of COVID-19: a modelling study
Gilbert et al., 2020
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence
Moritz et al., 2020
Crowding and the shape of COVID-19 epidemics
Rader et al., 2020
Potential short-term outcome of an uncontrolled COVID-19 epidemic in Lombardy, Italy, February to March 2020
Guzzetta et al., 2020
Novel coronavirus (2019-nCoV) early-stage importation risk to Europe, January 2020
Pullano et al., 2020