WP2 List of subtasks and leadersSubtask 2.1.1. Systematic literature review activity for each prototype pathogen and disease model FEM, ISS, INSERM, ITM. Leader: ISS (M1-M45)
Subtask 2.1.2. Complement the literature reviews by expert input. FEM, ISS, ETH, AVIA-GIS, ISCIII, IPHS, THL, ANSES, KU LEUVEN, CIRAD, IRSTEA, INESC ID, ITM, INSERM, IPHS, ISID Leader: FEM (M6-M36)
Subtask 2.1.3. Identification of drivers for disease emergence. ERGO, FEM. Leader: ERGO (M1-M48).
Subtask 2.1.4. Selection of AMR pathogens in humans and animals. ETH, ISS. Leader: ETH (M1-12).
Subtask 2.2.1. Design of the Information System for Data Management from Multi-Sources. CIRAD,FEM, ISS, AVIA-GIS. Leader: CIRAD (M1-M18)
Subtask 2.2.2. Collection of traditional epidemiological data. FEM, ISS, ETH, AVIA-GIS, ISCIII, IPHS,THL, ANSES, KU LEUVEN, CIRAD, IRSTEA, INESC ID, ITM, INSERM, IPHS, ISID. Leader: ISS (M1-M48)
Subtask 2.2.3. Automatic acquisition via web-scraping. CIRAD, IRSTEA, INESC ID, IPHS, UOXF, INRA Leader: CIRAD (M7-M48).
Subtask 2.2.4. Genomic data collection for phylodynamic analyses. FEM, ISS, ETH, INRA Leader: KU LEUVEN (M1-M36).
Subtask 2.2.5. Collection of point prevalence data for AMR in food animals. ETH, ISS Leader: ETH (M1-M36).
Subtask 2.2.6. Parameters estimation FEM, ISS. Leader: FEM (M1-M48).